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Species belonging to selected taxon:

Barnadesia spinosa



ABOUT THIS RECORD

ID: MNEST000208
species: Barnadesia spinosa
miRNA family: MIR169
source: miRNEST

Taxonomy by NCBI:
Barnadesia spinosa Barnadesia Barnadesioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTAGCCAAGGATGACTTGCCA

miRNA*
GCAAGCATCCTTGCCTACTA

mismatches: 2
bulges: 1

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pre-miRNA
TCTAGCAAAATGGAAGAAAGGTCTAAGACGAAGAAAGGAGTCTTTTTTGTGTAGCCAAGGATGACTTGCCACACGGCTAAGAGCCATTGAATTGGCCAAG
CTAGCGGCAAGCATCCTTGCCTACTACATGACAAGCTTTTTTCTCGCATCGTAGATCTTTACTTCTCTATCTT


dot-bracket secondary structure
...........((((((((((((((.(((((.((((((((.(((((.(((((((.((((((((.((((((....((((....((((......))))..))
))...)))))))))))))).)))).))).)).))))))))))))))..)).))))))))).))))).......



SIMILARITIES
miRBase osa-MIR169e: 0.000002

PMRD osa-miR169e: 0.000002

microPC no hits
UniProt no hits

RFAM MIR169_2: 0.00004
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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